BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G07LP1|AL426415
(194 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1745 129 2e-30
>3x_Contig1745
Length = 19830
Score = 129 bits (63), Expect = 2e-30
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 gagttactttataatagctttaattacatttgcttttcgatatcaagmcatctatatgta 68
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10291 gagttactttataat-gctttaattacatttgcttttcgatatcaagccatctatatgta 10233
Query: 69 cataaatatatat 81
|||||||||||||
Sbjct: 10232 cataaatatatat 10220
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,874
Number of Sequences: 1807
Number of extensions: 28874
Number of successful extensions: 14600
Number of sequences better than 1.0e-20: 1
length of query: 194
length of database: 10,358,551
effective HSP length: 15
effective length of query: 179
effective length of database: 10,331,446
effective search space: 1849328834
effective search space used: 1849328834
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 48 (98.7 bits)